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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813698.1_cds_XP_016497658.1_11765
CDS Infomation

[gene=LOC107816449] [db_xref=GeneID:107816449] [protein=putative auxin efflux carrier component 5] [protein_id=XP_016497658.1] [location=join(28402..28909,29742..29922,30024..30109,30203..30360,30428..30504,30600..30666)] [gbkey=CDS]
Sequence

ATGATATCCCTACGTGATGTCTACCATGTTGTGGCGGCCACTATCCCTTTATATGTCGTC
ATGATCTTAGCCTATATCTCCGTAAGGTGGTGGAAACTCTTTTCACCAGAGCAATGCTCT
GGCATCAACAAGTTTGTGGCAAAATTTTCAATACCTTTATTATCCTTCCAAGTGATATCA
GAAAGCAACCTCTACAAAGTAAACCTGAAGCTTCTATTAGCAGATTTCATACAAAAATTT
CTTGCTCTGTTTCTACTGGCAGTTTTTGCCAAACTGAAGCCCAAAGGAAACCTGACTTGG
ATCATAACAGGTCTTTCAGTTTCAACCCTTCCCAATACCTTAATCTTGGGGATTCCACTA
GTAAAGGCCATTTTTGGTGATGCAGCAGCAGAACTACTAGTGCAGATAATTGTACTGCAG
AGTTTAATTTGGTACAACCTCCTACTATTCTTGTTCGAGCTCAATGCAACAAAAGAATCT
TATGTGCCATCACCATCAGAAGTAGCAGTTGAGCTCGAGGTCCCTGAAGAATCAGAATTG
GAAGAGGACAGGGAGGAGGAAGCAAAAGCCATATGCCCAAGGAAGACAAAGATTATGCTA
ATTCTTCTAATAGTTGGAAGGAAACTCATAATAAATCCTAATACACATGCAACTCTGGCG
GGTATTATTTGGTCAAGCATACACTTCAGGTGGGGAATCAATCTACCAACAATTGTTGGA
CGATCAATATCAATACTTTCAGATGGAGGGCTAGGAATGGCAATGTTTAGCATAGGTGTT
TTCATGGCATCCCAAGCTAGTATTATAGCATGCGGAACCAGAAAAGCAATATTAGCAATG
GCACTAAAGTTTGTTCTTGGACCTGTACTCATGGCAATCTCATCTATTGCTGTTGGACTA
AGGGGAAAATTGCTAAAATTGGCGATAGTGCAGGCAGCCCTTCCCCAAGGAATCGTTCCT
TTTGTGTTTGCCAAGGAATATAATACACATCCTACCATCTTAAGTACAGGGGTAATCTTT
GGCATGCTGATCGCAATACCAATTGCTTTGGCATACTATTTCCTTTTGGAAATATGA

Peptide Sequence

PEP ID

XP_016497658.1
PEP Infomation

PREDICTED: putative auxin efflux carrier component 5 [Nicotiana tabacum]
Sequence

MISLRDVYHVVAATIPLYVVMILAYISVRWWKLFSPEQCSGINKFVAKFSIPLLSFQVIS
ESNLYKVNLKLLLADFIQKFLALFLLAVFAKLKPKGNLTWIITGLSVSTLPNTLILGIPL
VKAIFGDAAAELLVQIIVLQSLIWYNLLLFLFELNATKESYVPSPSEVAVELEVPEESEL
EEDREEEAKAICPRKTKIMLILLIVGRKLIINPNTHATLAGIIWSSIHFRWGINLPTIVG
RSISILSDGGLGMAMFSIGVFMASQASIIACGTRKAILAMALKFVLGPVLMAISSIAVGL
RGKLLKLAIVQAALPQGIVPFVFAKEYNTHPTILSTGVIFGMLIAIPIALAYYFLLEI

Transcript Sequence

Gene sequence data has not been registered.